Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4720

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849310 to 850936 13087 mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851220 to 854422 13088 mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854665 to 858103 13089

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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850,418 + 13087 mRNA_4719 0.68 -0.4
850,421 - 13087 mRNA_4719 0.68 -0.1
850,551 - 13087 mRNA_4719 0.76 -0.2
850,993 - -0.4
851,104 - -0.6
851,332 - -1.7
851,602 - 13088 mRNA_4720 0.12 3.0
851,665 - 13088 mRNA_4720 0.14 1.6
852,096 - 13088 mRNA_4720 0.27 0.0
852,354 - 13088 mRNA_4720 0.35 1.1
852,808 + 13088 mRNA_4720 0.50 -0.5
853,057 + 13088 mRNA_4720 0.57 1.1
853,070 - 13088 mRNA_4720 0.58 0.0
853,075 - 13088 mRNA_4720 0.58 0.0
853,096 + 13088 mRNA_4720 0.59 -0.4
853,295 - 13088 mRNA_4720 0.65 0.9
853,350 - 13088 mRNA_4720 0.67 -0.1
853,649 + 13088 mRNA_4720 0.76 -1.3
853,655 - 13088 mRNA_4720 0.76 0.4
853,825 + 13088 mRNA_4720 0.81 -1.2
853,869 - 13088 mRNA_4720 0.83 0.3
854,104 + 1.2
854,122 + -1.0
854,250 + 0.1
854,365 + -1.5
854,407 - 0.6
854,410 + -1.0
854,415 - -1.2
854,420 + -0.2
854,528 + -0.2
854,587 - 0.0
854,589 - -0.2
854,593 - 1.3
854,610 + -0.5
854,664 + -0.5
854,743 + 1.0
854,753 - 0.3
854,756 + 0.0
854,884 - -2.6