Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4691

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4690: 13058 - HMMPfam-Heterokaryon incompatibility protein Het-C-PF07217, at 783339 to 787092 13058 mRNA_4691: 13059 - Hypothetical Protein, at 787368 to 788152 13059 mRNA_4692: 13060 - K00559 E2.1.1.41, SMT1, ERG6 sterol 24-C-methyltransferase, at 788429 to 789828 13060

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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786,530 - 13058 mRNA_4690 0.85 0.0
786,824 + 1.0
786,942 - 0.1
786,963 + -2.1
786,971 - -0.8
786,979 - -0.5
786,983 + 0.2
786,996 - 0.0
786,996 - 0.1
787,129 - -1.9
787,132 + -0.7
787,136 - 0.6
787,137 - 0.1
787,149 - 0.0
787,154 + -0.6
787,160 + 0.5
787,175 - 0.9
787,267 - -0.4
787,274 - -0.8
787,274 - 0.7
787,277 + -0.4
787,279 + -0.0
787,282 - -0.7
787,300 - -0.3
787,300 - 1.2
787,328 + -0.1
787,337 - 2.6
787,463 + 13059 mRNA_4691 0.12 0.7
787,586 + 13059 mRNA_4691 0.28 0.0
787,603 + 13059 mRNA_4691 0.30 2.6
787,606 + 13059 mRNA_4691 0.30 0.4
788,025 - 13059 mRNA_4691 0.84 1.3
788,142 - 0.1
788,143 + -0.3
788,186 + -0.5
788,188 - 0.8
788,197 - 0.8
788,203 - -0.5
788,203 + 1.7
788,209 - 1.4
788,212 + -0.3
788,212 - 0.6
788,213 - 0.2
788,217 - -0.0
788,222 + 1.3
788,224 + -0.6