Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4650

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4649: 13017 - K03934 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, at 692072 to 694733 13017 mRNA_4650: 13018 - K02919 RP-L36, MRPL36, rpmJ large subunit ribosomal protein L36, at 695007 to 695565 13018 mRNA_4651: 13019 - Hypothetical Protein, at 696005 to 696627 13019

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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694,814 - -0.9
694,831 + -2.4
694,846 + 0.2
694,859 - -1.1
694,861 + -0.2
694,875 - -0.7
694,882 - -0.1
695,125 - 13018 mRNA_4650 0.21 2.0
695,137 + 13018 mRNA_4650 0.23 -0.9
695,145 + 13018 mRNA_4650 0.25 -0.5
695,286 + 13018 mRNA_4650 0.50 -0.5
695,568 + 0.7
695,607 + 1.6
696,032 - -0.0
696,044 - -1.8
696,301 + 13019 mRNA_4651 0.48 1.1