Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4609

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4608: 12976 - KOG0254 Predicted transporter (major facilitator superfamily), at 572565 to 575380 12976 mRNA_4609: 12977 - K00008 SORD, gutB L-iditol 2-dehydrogenase, at 575731 to 577281 12977

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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574,840 - 12976 mRNA_4608 0.81 2.3
575,011 + 12976 mRNA_4608 0.87 -0.2
575,174 - 0.3
575,193 + -0.1
575,483 - -0.8
575,504 - -1.3
575,510 - 1.0
575,511 + 0.3
575,516 - 0.5
575,519 - 0.5
575,520 - -0.7
575,521 + 0.2
575,538 - -1.0
575,553 - 0.3
575,559 + -0.2
575,562 - -0.3
575,611 - 0.0
575,613 + -0.6
575,616 + -0.1
575,617 - 0.3
575,629 + 0.1
575,636 - 0.1
575,640 - 0.8
575,643 + -0.1
575,643 + -0.9
575,646 - 0.1
575,651 + 1.1
575,656 + -1.4
575,657 + 1.1
575,666 + 1.6
575,687 - 0.4
575,689 + -2.3
575,753 - -0.2
575,908 + 12977 mRNA_4609 0.11 -1.2
575,912 + 12977 mRNA_4609 0.12 -2.8
575,915 - 12977 mRNA_4609 0.12 2.1
575,922 - 12977 mRNA_4609 0.12 -0.2
575,941 - 12977 mRNA_4609 0.14 1.0
575,948 + 12977 mRNA_4609 0.14 -0.4
576,952 - 12977 mRNA_4609 0.79 0.1
576,963 + 12977 mRNA_4609 0.79 0.2
577,511 - 0.4
577,693 - -1.2
577,696 + -0.4
578,122 - 1.5
578,248 - -0.8
578,260 + 0.9
578,264 + -0.3
578,270 + -0.0
578,272 + -1.4
578,277 + -1.5
578,280 - -0.1