Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4571

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4571: 12939 - KOG4419 5' nucleotidase, at 493411 to 495654 12939 mRNA_4572: 12940 - K06963 TAN1, THUMPD1 tRNA acetyltransferase TAN1, at 495766 to 497109 12940

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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492,426 - 0.8
492,438 - -0.1
492,449 - -0.2
492,459 + 0.3
492,569 + 1.7
492,576 + -3.5
492,581 - -0.2
492,587 - 0.6
492,591 - -0.8
492,598 - -2.3
492,604 - 1.0
492,610 + -0.1
492,611 + 0.4
492,612 + -1.2
492,707 - -1.0
492,717 - -1.6
492,726 + 0.0
492,726 - -0.5
492,726 + 0.1
492,728 + 1.9
492,740 + -0.2
492,748 - -0.6
492,748 + 0.5
492,753 + -1.6
492,754 + -0.1
492,758 - -1.9
492,776 - -0.8
492,777 - -0.7
492,783 - 1.3
492,799 - -2.0
492,799 + -0.1
492,800 - -0.7
492,803 - -0.5
492,831 - -0.0
492,832 - 0.4
492,841 + -1.5
492,849 - 0.7
492,853 + 0.8
492,859 - -0.0
492,863 + 0.1
492,863 + 1.6
492,872 + -1.4
492,873 + -0.1
492,873 - -2.7
492,875 + 0.2
492,884 - 0.9
492,886 - -1.3
492,889 - -0.5
492,898 - 0.9
492,907 + 0.6
492,919 - -0.3
492,919 - -0.1
492,947 - -1.8
492,947 + 0.3
492,949 - 1.5
492,954 + 0.2
492,960 - -0.1
492,994 - -0.5
493,025 + -0.2
493,089 + -0.2
493,166 - -0.1
493,438 + 0.2
493,477 - -1.6
494,171 + 12939 mRNA_4571 0.34 0.9
494,329 - 12939 mRNA_4571 0.41 -0.2
495,365 + 12939 mRNA_4571 0.87 -1.8
495,369 - 12939 mRNA_4571 0.87 0.4