Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4542

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4542: 12910 - K05302 SETD6 N-lysine methyltransferase SETD6, at 420750 to 422529 12910 mRNA_4543: 12911 - HMMPfam-Rrp15p-PF07890, at 422778 to 423805 12911

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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420,106 + -0.4
420,146 + 1.5
420,262 - -0.4
420,263 + -0.5
420,263 - -1.5
420,263 + -0.0
420,277 - 0.8
420,299 + -0.6
420,377 + -0.1
421,319 + 12910 mRNA_4542 0.32 0.2
421,469 - 12910 mRNA_4542 0.40 0.4
422,039 + 12910 mRNA_4542 0.72 1.9
422,313 - 12910 mRNA_4542 0.88 1.2
422,375 - 0.2
422,384 - 0.6
422,526 - 1.0
422,609 + -0.6
422,660 + 1.6
422,661 - -0.6
422,662 + -2.4
422,669 - -1.3
422,675 + -0.4