Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4526

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4525: 12893 - KOG0143 Iron/ascorbate family oxidoreductases, at 381008 to 382487 12893 mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382744 to 384550 12894 mRNA_4527: 12895 - SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 384813 to 386229 12895

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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381,808 - 12893 mRNA_4525 0.54 -1.7
381,812 + 12893 mRNA_4525 0.54 -1.1
382,086 + 12893 mRNA_4525 0.73 1.5
382,112 + 12893 mRNA_4525 0.75 -1.7
382,142 - 12893 mRNA_4525 0.77 -3.0
382,244 - 12893 mRNA_4525 0.84 -0.0
382,259 + 12893 mRNA_4525 0.85 2.1
382,285 - 12893 mRNA_4525 0.86 2.0
382,291 - 12893 mRNA_4525 0.87 2.5
382,291 - 12893 mRNA_4525 0.87 -1.4
382,298 + 12893 mRNA_4525 0.87 -0.9
382,400 + -0.1
382,405 + -0.6
382,518 - -0.6
382,676 - -0.3
382,684 + -0.2
382,807 - -0.0
382,828 - 0.7
382,934 + 12894 mRNA_4526 0.11 -0.6
382,979 + 12894 mRNA_4526 0.13 0.5
383,104 + 12894 mRNA_4526 0.20 -0.5
383,233 - 12894 mRNA_4526 0.27 0.9
383,820 - 12894 mRNA_4526 0.60 -0.7
383,858 - 12894 mRNA_4526 0.62 -0.3
383,877 + 12894 mRNA_4526 0.63 -0.9
384,590 - -0.8
384,608 - 0.5
384,904 - -0.0
385,233 + 12895 mRNA_4527 0.30 -1.3
385,366 + 12895 mRNA_4527 0.39 -0.7
385,369 - 12895 mRNA_4527 0.39 -0.6
385,379 + 12895 mRNA_4527 0.40 0.3