Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4403

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97723 to 98507 12769 mRNA_4402: 12770 - Hypothetical Protein, at 98627 to 98893 12770 mRNA_4403: 12771 - Hypothetical Protein, at 99143 to 102687 12771 mRNA_4404: 12772 - HMMPfam-Fatty acid hydroxylase superfamily-PF04116, at 103053 to 104397 12772

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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98,550 - 0.2
98,662 + 12770 mRNA_4402 0.13 -0.6
98,697 + 12770 mRNA_4402 0.26 0.2
98,697 + 12770 mRNA_4402 0.26 0.6
98,709 + 12770 mRNA_4402 0.31 1.1
98,836 - 12770 mRNA_4402 0.78 0.2
98,981 - -0.1
99,140 - -2.2
99,145 - 0.3
99,146 - -0.4
99,157 + -1.1
99,169 + -0.0
99,185 + 1.0
99,200 + 2.2
99,266 + -0.9
99,268 + 0.8
99,276 + 0.4
99,310 + 1.5
99,335 + -0.1
99,444 - -0.5
99,465 - -0.7
99,475 - -0.0
99,480 + -1.1
99,632 - 12771 mRNA_4403 0.14 -1.5
100,029 - 12771 mRNA_4403 0.25 -0.4
100,367 - 12771 mRNA_4403 0.35 0.2
100,438 - 12771 mRNA_4403 0.37 1.7
100,485 + 12771 mRNA_4403 0.38 1.2
101,002 - 12771 mRNA_4403 0.52 0.1
101,079 + 12771 mRNA_4403 0.55 -0.7
101,117 + 12771 mRNA_4403 0.56 0.5
101,217 + 12771 mRNA_4403 0.59 -2.5
101,301 + 12771 mRNA_4403 0.61 -0.0
101,518 - 12771 mRNA_4403 0.67 0.3
101,829 + 12771 mRNA_4403 0.76 0.8
102,101 + 12771 mRNA_4403 0.83 -0.4
102,104 + 12771 mRNA_4403 0.84 -0.3
102,122 - 12771 mRNA_4403 0.84 -1.7
102,276 - 12771 mRNA_4403 0.88 1.1
102,340 + 1.3
102,417 + -0.0
102,422 + -2.2
102,580 + -0.1
102,706 + -1.0
102,996 + -1.7
103,171 + -1.3
103,176 - -1.6
103,649 + 12772 mRNA_4404 0.44 -0.3
103,649 + 12772 mRNA_4404 0.44 -1.4