Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4392

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4391: 12759 - Hypothetical Protein, at 79565 to 80188 12759 mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80185 to 81389 12760 mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844 12761

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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79,368 + 0.8
79,638 - 12759 mRNA_4391 0.12 0.5
79,725 - 12759 mRNA_4391 0.26 -0.6
79,792 + 12759 mRNA_4391 0.36 -0.7
80,034 + 12759 mRNA_4391 0.75 -0.1
80,318 + 12760 mRNA_4392 0.11 1.4
80,617 - 12760 mRNA_4392 0.36 0.6
81,192 + 12760 mRNA_4392 0.84 1.0
81,203 - 12760 mRNA_4392 0.84 0.9
81,342 - 2.1
81,354 - -2.3
81,367 + -1.7
81,483 + 1.4
81,504 + 0.2
81,516 + 1.4
81,524 + -0.5
81,542 - -0.1
81,646 - -1.7
81,650 - -0.2
81,655 + 0.7
81,658 - 0.7
81,661 + 1.1
81,674 - -0.7
81,699 - -1.3
81,701 - 1.9
81,701 - 0.3
81,706 + -0.6
81,709 - 0.4
81,709 - -1.9
81,710 + -1.7
81,710 + -0.9
81,716 + -0.8
81,716 + -1.2
81,727 - 1.5
81,741 + 0.1
81,759 + -0.1
81,760 - 1.7
81,760 - -1.3
81,761 - 0.4
81,762 - -0.1
81,769 - -1.3
81,773 - -1.8
81,778 - -1.2
81,784 + -1.9
81,795 - -0.8
81,849 + 1.2
81,869 + 0.0
81,886 - 1.3
81,896 - 0.8
81,898 + 0.4
81,900 - -0.9
81,911 - 2.0
81,913 - -2.0
81,924 + -0.1
81,929 + 1.6
82,077 + 1.1
82,079 + 0.2
82,079 + 0.4
82,087 + -1.6
82,096 + 1.7
82,236 - 2.1
82,243 - 0.8
82,380 - -0.1