Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4371

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4370: 12738 - HMMPfam-Purine nucleoside permease (NUP)-PF06516,PIRSF--PIRSF013171, at 30221 to 32027 12738 mRNA_4371: 12739 - K10877 RAD54B DNA repair and recombination protein RAD54B, at 32512 to 35317 12739

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
31,675 - 12738 mRNA_4370 0.80 -0.1
31,682 + 12738 mRNA_4370 0.81 1.1
31,705 - 12738 mRNA_4370 0.82 1.0
31,810 - 12738 mRNA_4370 0.88 0.9
31,920 + -0.9
31,953 - 0.1
32,084 + -0.8
32,104 - -0.6
32,105 + 0.8
32,124 - 0.6
32,126 + 2.1
32,130 + -0.4
32,130 + -0.3
32,132 - 0.4
32,133 - 1.5
32,134 - 0.1
32,157 - 0.3
32,198 + -0.3
32,251 - 0.5
32,257 - -0.8
32,260 - 0.3
32,260 - 1.4
32,261 - 0.9
32,263 - -0.1
32,287 - 1.4
32,311 + -0.5
32,318 + -0.4
32,328 + -1.2
32,437 - 0.3
32,455 - 0.3
32,524 - -0.2
32,639 - 2.4
32,662 + -0.9
32,664 + -0.9
32,696 - 1.1
32,766 - 0.1
32,815 + 12739 mRNA_4371 0.11 0.1
32,993 - 12739 mRNA_4371 0.17 -1.7
33,267 - 12739 mRNA_4371 0.27 -0.9
33,394 + 12739 mRNA_4371 0.31 -0.9
33,406 + 12739 mRNA_4371 0.32 0.9
33,561 + 12739 mRNA_4371 0.37 2.2
33,639 + 12739 mRNA_4371 0.40 -0.0
33,662 - 12739 mRNA_4371 0.41 -0.2
33,682 + 12739 mRNA_4371 0.42 0.5
34,904 + 12739 mRNA_4371 0.85 0.6
34,969 - 12739 mRNA_4371 0.88 0.8
34,986 + 12739 mRNA_4371 0.88 0.9
35,006 + 12739 mRNA_4371 0.89 0.5
35,007 + 12739 mRNA_4371 0.89 0.6
35,158 + 1.4
35,159 - -1.8
35,213 - 2.9
35,416 + 0.9
35,453 + 0.2
36,005 - 1.8
36,023 + -1.0
36,120 + 1.8
36,196 + 0.1