Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4367

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4366: 12734 - K11650 SMARCD SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D, at 22211 to 24480 12734 mRNA_4367: 12735 - K08856 STK16 serine/threonine kinase 16, at 24559 to 26572 12735 mRNA_4368: 12736 - K00652 bioF 8-amino-7-oxononanoate synthase, at 26670 to 28178 12736

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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24,389 + -1.5
24,522 - -0.0
24,750 - 0.8
24,869 + 12735 mRNA_4367 0.15 0.6
24,884 + 12735 mRNA_4367 0.16 -0.8
24,982 + 12735 mRNA_4367 0.21 -1.2
25,125 + 12735 mRNA_4367 0.28 0.8
25,231 - 12735 mRNA_4367 0.33 1.2
25,540 + 12735 mRNA_4367 0.49 1.7
25,723 - 12735 mRNA_4367 0.58 1.5
26,112 - 12735 mRNA_4367 0.77 0.6
26,284 + 12735 mRNA_4367 0.86 0.4
26,307 + 12735 mRNA_4367 0.87 0.3
26,442 + 0.0
26,467 + -0.9
26,605 - 0.7
26,610 + 2.6