Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4318

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4317: 12685 - K07025 K07025 putative hydrolase of the HAD superfamily, at 1891657 to 1892743 12685 mRNA_4318: 12686 - HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427, at 1892853 to 1893990 12686 mRNA_4319: 12687 - Hypothetical Protein, at 1894697 to 1895182 12687

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,892,153 + 12685 mRNA_4317 0.46 -2.3
1,892,287 - 12685 mRNA_4317 0.58 0.2
1,892,425 - 12685 mRNA_4317 0.71 -0.5
1,893,029 - 12686 mRNA_4318 0.15 -0.6
1,893,031 + 12686 mRNA_4318 0.16 -0.2
1,893,177 - 12686 mRNA_4318 0.28 0.1
1,893,183 + 12686 mRNA_4318 0.29 0.7
1,893,439 - 12686 mRNA_4318 0.51 0.8
1,893,616 + 12686 mRNA_4318 0.67 3.1
1,893,769 + 12686 mRNA_4318 0.80 -1.4
1,894,037 - -0.2
1,894,309 - -1.4
1,894,463 - 1.9
1,894,489 - -1.1
1,894,554 - 1.2
1,894,560 - 1.1
1,894,562 - 0.9
1,894,563 + 0.3
1,894,572 + 1.1
1,894,676 + 0.5
1,894,728 - 0.6
1,894,737 + 0.3
1,894,970 + 12687 mRNA_4319 0.56 -1.6