Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4205

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4204: 12572 - K15292 STXBP1, MUNC18-1 syntaxin-binding protein 1, at 1605498 to 1608617 12572 mRNA_4205: 12573 - K09276 YBX1, NSEP1 Y-box-binding protein 1, at 1609295 to 1611072 12573 mRNA_4206: 12574 - Hypothetical Protein, at 1611148 to 1611771 12574 mRNA_4207: 12575 - BLAST similar to An07g08470 [Aspergillus kawachii IFO 4308], at 1611743 to 1613207 12575

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,608,695 - 0.9
1,608,946 - -0.4
1,608,982 + 0.8
1,609,156 - -0.8
1,609,891 - 12573 mRNA_4205 0.34 0.6
1,609,988 + 12573 mRNA_4205 0.39 0.6
1,609,995 - 12573 mRNA_4205 0.39 0.0
1,610,301 - 12573 mRNA_4205 0.57 -1.3
1,610,744 - 12573 mRNA_4205 0.81 0.1
1,610,875 - 12573 mRNA_4205 0.89 -0.4
1,610,879 + 12573 mRNA_4205 0.89 -0.5
1,610,899 - -0.4
1,610,910 + -0.7
1,610,925 - -0.2
1,611,086 - 0.5
1,611,197 - -0.2
1,611,220 - 12574 mRNA_4206 0.12 -0.4
1,611,236 + 12574 mRNA_4206 0.14 -0.6
1,611,336 + 12574 mRNA_4206 0.30 0.7
1,611,374 - 12574 mRNA_4206 0.36 1.7
1,611,378 + 12574 mRNA_4206 0.37 0.0
1,611,510 - 12574 mRNA_4206 0.58 0.8
1,611,518 + 12574 mRNA_4206 0.59 -0.6
1,611,519 - 12574 mRNA_4206 0.59 -0.5
1,611,524 + 12574 mRNA_4206 0.60 0.4
1,611,526 - 12574 mRNA_4206 0.61 1.2
1,611,542 - 12574 mRNA_4206 0.63 -0.8
1,611,641 + 12574 mRNA_4206 0.79 0.4
1,611,647 + 12574 mRNA_4206 0.80 -0.0