Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4169

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4168: 12536 - K09487 HSP90B, TRA1 heat shock protein 90kDa beta, at 1519287 to 1521954 12536 mRNA_4169: 12537 - K13299 GSTK1 glutathione S-transferase kappa 1, at 1522602 to 1523728 12537

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,521,929 - -1.9
1,522,195 - -1.7
1,522,225 + -1.2
1,522,357 - -0.8
1,522,366 - 0.4
1,522,368 - -2.4
1,522,373 - -0.0
1,522,386 - 0.4
1,522,389 + 0.9
1,522,522 - -1.5
1,522,532 + 0.5
1,522,539 + -0.3
1,522,540 - -1.3
1,522,591 + -1.3
1,522,847 + 12537 mRNA_4169 0.22 0.9
1,522,996 - 12537 mRNA_4169 0.35 1.5
1,523,115 + 12537 mRNA_4169 0.46 0.1
1,523,421 + 12537 mRNA_4169 0.73 0.0
1,523,685 - -0.8
1,523,701 - -2.4
1,523,721 - 1.2
1,523,775 - 0.1
1,523,851 - -0.6
1,523,852 - -0.5
1,523,867 - 1.4
1,523,871 + -2.0
1,523,878 - -1.8
1,523,894 - -2.4
1,523,898 + 2.4
1,523,938 - -0.0
1,523,951 + -0.1
1,524,073 - -0.1
1,524,235 - 1.0
1,524,252 + 0.1
1,524,359 + -1.0
1,524,489 + -0.7
1,524,644 - 0.4