Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4118

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4117: 12485 - K15728 LPIN phosphatidate phosphatase LPIN, at 1388981 to 1392980 12485 mRNA_4118: 12486 - Hypothetical Protein, at 1393174 to 1394335 12486 mRNA_4119: 12487 - KOG0118 FOG RRM domain, at 1395124 to 1396771 12487

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,392,679 - 1.1
1,392,994 - -0.4
1,393,142 + 0.1
1,393,155 + 0.4
1,393,295 - 12486 mRNA_4118 0.10 1.5
1,393,299 - 12486 mRNA_4118 0.11 0.9
1,393,417 - 12486 mRNA_4118 0.21 -0.6
1,393,430 + 12486 mRNA_4118 0.22 -0.5
1,394,037 + 12486 mRNA_4118 0.74 1.3
1,394,330 - 1.0
1,394,479 + -0.4
1,394,499 - -0.0
1,394,585 + -2.9
1,394,646 - -0.1
1,394,743 - -2.2
1,394,764 - 1.2
1,394,797 - -0.8
1,395,018 + 1.1
1,395,063 - 2.2
1,395,122 - -0.8
1,395,245 - -0.7