Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4095

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4095: 12463 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 1346768 to 1349335 12463 mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1349732 to 1355090 12464

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,345,920 - -1.1
1,346,032 + 1.6
1,346,045 - 0.2
1,346,206 - -1.9
1,346,210 + -1.8
1,346,213 - 2.2
1,346,229 - -0.8
1,346,232 - -0.2
1,346,240 - 1.7
1,346,341 - -0.3
1,346,405 + 0.3
1,346,470 + 0.1
1,346,591 + -1.4
1,346,622 - -0.5
1,346,623 - 0.2
1,346,636 - 0.1
1,346,638 + 0.2
1,346,661 - 0.1
1,346,680 + 1.3
1,346,682 + -3.3
1,346,699 + -2.4
1,346,709 + -0.3
1,346,717 + 0.3
1,346,749 + -1.2
1,346,822 - -1.2
1,346,844 + -0.2
1,346,856 + -0.1
1,346,858 + 0.9
1,346,879 + 1.1
1,346,879 + -0.2
1,346,881 - -0.9
1,346,882 + 1.2
1,346,887 + 1.6
1,346,897 + -0.0
1,346,901 - 1.3
1,347,277 - 12463 mRNA_4095 0.20 0.3
1,347,295 - 12463 mRNA_4095 0.21 0.7
1,347,444 - 12463 mRNA_4095 0.26 0.2
1,347,555 + 12463 mRNA_4095 0.31 0.3
1,347,594 - 12463 mRNA_4095 0.32 1.0
1,347,703 + 12463 mRNA_4095 0.36 0.2
1,347,891 + 12463 mRNA_4095 0.44 -0.5
1,347,962 + 12463 mRNA_4095 0.46 -0.4
1,348,370 - 12463 mRNA_4095 0.62 0.2
1,348,391 - 12463 mRNA_4095 0.63 0.0
1,348,579 + 12463 mRNA_4095 0.71 1.0
1,348,845 + 12463 mRNA_4095 0.81 -0.0
1,348,857 + 12463 mRNA_4095 0.81 0.2
1,348,885 - 12463 mRNA_4095 0.82 2.6
1,348,945 - 12463 mRNA_4095 0.85 -3.1
1,348,989 + 12463 mRNA_4095 0.86 -0.4
1,349,166 + 0.0
1,349,191 + -0.4
1,349,277 - 2.2
1,349,284 - 1.6
1,349,318 + 0.2
1,349,452 - -1.7
1,349,618 + 0.8
1,349,629 + -0.3
1,349,689 - 0.0
1,350,026 - -0.9
1,350,077 + -0.8
1,350,113 - 0.8
1,350,175 + -1.1
1,350,325 + 12464 mRNA_4096 0.11 -0.1
1,350,325 + 12464 mRNA_4096 0.11 -0.1