Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4086

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4086: 12454 - Hypothetical Protein, at 1326247 to 1326813 12454 mRNA_4087: 12455 - HMMPfam-Tannase and feruloyl esterase-PF07519,SUPERFAMILY--SSF53474, at 1327075 to 1329367 12455

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,325,247 - 2.1
1,325,250 + 1.3
1,325,251 + 0.8
1,325,253 - -0.2
1,325,258 + -0.4
1,325,260 + -0.0
1,325,263 - 0.9
1,325,264 - -1.4
1,325,264 + 0.3
1,325,283 + -0.8
1,325,289 - 0.0
1,325,291 - -0.4
1,325,293 - 1.3
1,325,294 + 0.9
1,325,341 - -0.1
1,325,350 - 0.6
1,325,359 - 0.4
1,325,368 - -0.8
1,325,374 - -1.4
1,325,379 - -1.4
1,325,380 - 2.5
1,325,385 + 1.3
1,325,390 + 0.6
1,325,395 - 0.5
1,325,409 + -1.7
1,325,414 + 0.1
1,325,416 - 0.1
1,325,417 + -0.2
1,325,427 + 1.2
1,325,430 + -0.5
1,325,434 - -1.1
1,325,458 + -1.0
1,325,482 - 0.1
1,325,575 + 2.6
1,325,575 + -0.2
1,325,587 - 0.4
1,325,588 - -0.7
1,325,593 + 2.9
1,325,596 - 0.8
1,325,602 + 1.1
1,325,617 - 0.6
1,325,624 - -0.0
1,325,665 + -3.8
1,325,730 + -1.7
1,325,733 + -0.2
1,325,753 + 0.3
1,325,756 + 0.7
1,325,770 - 0.6
1,325,815 - 0.8
1,325,818 - 0.3
1,325,871 + -0.3
1,325,885 - -0.2
1,325,886 + 0.6
1,325,887 + 0.0
1,325,891 + -0.1
1,325,899 + 0.1
1,325,901 - 0.9
1,325,919 + 0.9
1,325,986 - 1.6
1,325,989 + 0.1
1,326,037 - -0.3
1,326,101 - -2.2
1,326,178 - 3.6
1,326,180 - -0.2
1,326,225 - 2.5
1,326,282 - -1.0
1,326,285 + 0.1
1,326,737 + 12454 mRNA_4086 0.86 -0.4
1,327,680 + 12455 mRNA_4087 0.26 0.9