Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4003

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4002: 12370 - KOG4089 Predicted mitochondrial ribosomal protein L23, at 1122500 to 1123489 12370 mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1123880 to 1126136 12371 mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1126968 to 1131164 12372

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
1,123,499 - 0.3
1,123,520 - 0.1
1,123,525 + 0.1
1,123,533 + -0.9
1,123,612 - 1.8
1,123,642 - -0.1
1,123,643 + 0.1
1,123,646 - 2.6
1,123,649 + -1.6
1,123,650 - 0.6
1,123,657 + 0.3
1,123,658 - 0.0
1,123,662 + 1.1
1,123,664 - -0.9
1,123,665 - 0.3
1,123,672 + -0.3
1,123,675 - -0.1
1,123,681 + 0.7
1,123,685 + -0.4
1,123,704 + 1.8
1,123,706 - 0.3
1,123,734 - 0.1
1,123,850 + 0.4
1,123,883 - 0.9
1,123,892 - 0.3
1,123,903 + -1.8
1,123,905 - 0.5
1,124,011 + 0.1
1,124,092 + 0.3
1,124,330 - 12371 mRNA_4003 0.20 -0.3
1,124,433 + 12371 mRNA_4003 0.25 -0.9
1,124,483 - 12371 mRNA_4003 0.27 2.5
1,124,594 - 12371 mRNA_4003 0.32 0.7
1,124,738 + 12371 mRNA_4003 0.38 -1.0
1,125,035 - 12371 mRNA_4003 0.51 0.6
1,125,190 + 12371 mRNA_4003 0.58 1.4
1,125,303 + 12371 mRNA_4003 0.63 -0.7
1,125,320 + 12371 mRNA_4003 0.64 -0.5
1,125,919 - 0.0
1,126,160 + -2.2
1,126,168 + 0.8
1,126,169 - 1.4
1,126,327 + -0.6
1,126,531 + -0.2
1,126,615 + -0.9
1,126,624 - 0.6
1,126,624 + -0.4
1,126,644 + 0.0
1,126,645 + -0.4
1,126,652 + 1.0
1,126,774 - 1.6
1,126,776 + -0.9
1,126,787 - 0.5
1,126,789 - -1.2
1,126,798 + 0.6
1,126,938 - 0.4
1,126,944 + -0.6
1,127,004 + 0.8
1,127,105 - 0.6