Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3906

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865746 to 868815 12274 mRNA_3907: 12275 - Hypothetical Protein, at 869074 to 869751 12275

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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864,761 - 0.5
864,870 - 1.1
864,921 - -0.4
865,062 - 0.1
865,069 + -0.2
865,221 - -0.3
865,230 + 0.5
865,362 + 0.5
865,363 - -0.5
865,382 - 1.0
865,392 + 0.1
865,503 - 0.9
865,505 + 1.6
865,517 + 0.1
865,525 + 0.0
865,526 - 1.1
865,695 - -0.8
866,320 - 12274 mRNA_3906 0.19 0.3
866,400 - 12274 mRNA_3906 0.21 1.4
866,668 + 12274 mRNA_3906 0.30 -2.2
867,124 + 12274 mRNA_3906 0.45 0.8
867,664 + 12274 mRNA_3906 0.62 0.2
867,832 + 12274 mRNA_3906 0.68 1.5
868,276 + 12274 mRNA_3906 0.82 0.2
868,299 - 12274 mRNA_3906 0.83 2.5
868,418 - 12274 mRNA_3906 0.87 0.0
868,555 + 0.4
868,690 - 1.6
868,702 + -0.4
868,878 + 0.7
869,005 - 0.2
869,017 + 2.7
869,164 - 12275 mRNA_3907 0.13 -1.6
869,182 + 12275 mRNA_3907 0.16 -1.3
869,184 - 12275 mRNA_3907 0.16 -1.2
869,782 + 0.2