Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3854

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746204 to 748742 12221 mRNA_3854: 12222 - Hypothetical Protein, at 749490 to 750342 12222 mRNA_3855: 12223 - SUPERFAMILY--SSF52047, at 750615 to 752769 12223

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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748,648 - 1.0
748,650 + -0.2
748,657 + -1.9
748,782 - 0.4
748,800 + -0.1
748,810 - -0.4
748,814 - 0.2
748,831 + -0.7
748,912 + 0.4
748,914 + 0.3
748,915 - -0.7
748,931 + -0.8
748,935 + -1.1
748,936 - 0.3
748,937 + -0.0
748,939 - -0.8
748,948 + -0.3
748,953 - -0.8
748,976 - -2.5
748,982 + 0.9
748,991 + 1.2
748,998 - 1.9
749,044 + -1.0
749,048 - 0.0
749,057 - -1.5
749,058 - 0.5
749,063 - 0.3
749,068 + 0.4
749,071 + -0.5
749,072 + 0.1
749,089 - 0.7
749,096 + 0.2
749,098 - 0.5
749,225 + 0.5
749,227 - -0.1
749,243 - 0.1
749,251 - 2.5
749,258 - 2.5
749,259 + 0.1
749,263 + 0.5
749,266 + 0.2
749,268 - 0.8
749,283 + -0.9
749,364 - 0.3
749,373 - -0.4
749,374 + -1.7
749,379 + -2.2
749,388 - -0.1
749,392 + 1.1
749,393 - 0.3
749,395 + 0.9
749,402 + 1.2
749,402 + 1.1
749,409 + 1.5
749,416 - -0.9
749,422 + 1.3
749,423 + -0.3
749,425 - -0.2
749,425 + -0.2
749,538 + -0.5
749,583 - 12222 mRNA_3854 0.11 0.2
749,588 - 12222 mRNA_3854 0.11 -0.6
749,661 - 12222 mRNA_3854 0.20 -1.4
749,852 - 12222 mRNA_3854 0.42 1.3
749,999 - 12222 mRNA_3854 0.60 -0.8
750,004 + 12222 mRNA_3854 0.60 -1.0
750,021 - 12222 mRNA_3854 0.62 0.5
750,046 + 12222 mRNA_3854 0.65 1.0
750,391 + 0.9
751,165 + 12223 mRNA_3855 0.26 2.4
751,196 + 12223 mRNA_3855 0.27 1.4