Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3807

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3806: 12174 - K02365 ESP1 separase, at 618283 to 626082 12174 mRNA_3807: 12175 - HMMPfam-Docking domain of Afi1 for Arf3 in vesicle trafficking-PF07792,HMMPfam-Stabilization of polarity axis-PF08616, at 626477 to 629699 12175 mRNA_3808: 12176 - Hypothetical Protein, at 629784 to 630446 12176

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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626,137 + -1.7
626,141 + -0.8
626,161 + -0.6
626,282 - 1.8
626,295 + -0.8
626,296 - -0.0
626,431 - 1.0
626,440 - 0.1
626,446 + -0.4
626,452 - -1.0
626,553 - 1.8
626,615 - 1.1
626,731 + 0.8
626,740 - 0.4
626,744 - 1.4
626,767 - 1.6
626,808 + 12175 mRNA_3807 0.10 1.8
626,936 - 12175 mRNA_3807 0.14 -0.7
627,298 + 12175 mRNA_3807 0.25 1.0
627,343 + 12175 mRNA_3807 0.27 -0.3
627,470 - 12175 mRNA_3807 0.31 1.6
627,618 - 12175 mRNA_3807 0.35 -1.4
627,634 + 12175 mRNA_3807 0.36 0.5
627,640 - 12175 mRNA_3807 0.36 0.8
627,734 + 12175 mRNA_3807 0.39 0.6
628,041 - 12175 mRNA_3807 0.49 0.7
628,045 + 12175 mRNA_3807 0.49 0.3
628,099 + 12175 mRNA_3807 0.50 0.1
628,103 + 12175 mRNA_3807 0.50 0.7
628,245 - 12175 mRNA_3807 0.55 3.2
628,245 - 12175 mRNA_3807 0.55 0.7
628,266 - 12175 mRNA_3807 0.56 0.3
628,333 - 12175 mRNA_3807 0.58 0.9
628,349 - 12175 mRNA_3807 0.58 1.3
628,401 - 12175 mRNA_3807 0.60 0.1
628,490 - 12175 mRNA_3807 0.62 1.2
628,596 - 12175 mRNA_3807 0.66 0.7
628,636 - 12175 mRNA_3807 0.67 0.3
628,661 + 12175 mRNA_3807 0.68 -0.7
628,724 - 12175 mRNA_3807 0.70 -0.0
628,934 + 12175 mRNA_3807 0.76 0.9
629,061 - 12175 mRNA_3807 0.80 0.9
629,107 - 12175 mRNA_3807 0.82 0.1
629,339 - 12175 mRNA_3807 0.89 0.1
629,467 - 0.8
629,467 - 0.8
629,512 + -1.0
630,520 - -0.7
630,642 - -2.1
630,646 + 0.7
630,656 + -0.6
630,668 + 0.2