Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3803

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3802: 12170 - K01939 purA, ADSS adenylosuccinate synthase, at 611047 to 612951 12170 mRNA_3803: 12171 - Hypothetical Protein, at 613917 to 616021 12171 mRNA_3804: 12172 - Hypothetical Protein, at 616342 to 617222 12172

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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612,960 - 1.5
612,981 - 1.4
612,990 + -1.0
612,990 + -0.6
612,995 + -0.2
612,997 - -0.5
613,294 + -1.6
613,295 - -0.2
613,300 + -1.3
613,581 + 0.4
613,597 - -0.1
613,998 + -1.0
614,025 + -0.7
614,482 - 12171 mRNA_3803 0.27 -0.2
614,487 + 12171 mRNA_3803 0.27 -0.5
614,630 + 12171 mRNA_3803 0.34 -0.1
614,641 + 12171 mRNA_3803 0.34 -0.1
615,832 - -0.7
616,003 + 0.5
616,104 - 1.8
616,503 + 12172 mRNA_3804 0.18 0.2
616,531 + 12172 mRNA_3804 0.21 -0.3
616,537 - 12172 mRNA_3804 0.22 -1.3
616,689 + 12172 mRNA_3804 0.39 -1.3
616,689 + 12172 mRNA_3804 0.39 -0.9
616,689 + 12172 mRNA_3804 0.39 0.0
616,691 - 12172 mRNA_3804 0.40 -0.3
616,816 + 12172 mRNA_3804 0.54 -1.2
616,846 - 12172 mRNA_3804 0.57 -0.8
616,969 - 12172 mRNA_3804 0.71 -1.5
616,977 + 12172 mRNA_3804 0.72 0.5
616,981 + 12172 mRNA_3804 0.73 -0.3
617,008 - 12172 mRNA_3804 0.76 2.1