Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3783

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3782: 12150 - K04354 PPP2R2 serine/threonine-protein phosphatase 2A regulatory subunit B, at 568603 to 571218 12150 mRNA_3783: 12151 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 572145 to 573439 12151 mRNA_3784: 12152 - KOG1188 WD40 repeat protein, at 573950 to 575324 12152

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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571,481 + 0.1
572,041 - 0.4
572,053 - 0.3
572,060 + -0.1
572,258 + -0.1
572,353 + 12151 mRNA_3783 0.16 -0.6
572,651 - 12151 mRNA_3783 0.39 0.5
572,673 - 12151 mRNA_3783 0.41 0.5
572,674 + 12151 mRNA_3783 0.41 -0.3
573,082 - 12151 mRNA_3783 0.72 -0.3
573,082 - 12151 mRNA_3783 0.72 0.7
573,516 + -1.2
573,520 - 0.1
573,539 + 0.4
573,542 - -0.2
573,675 - -0.1
574,322 + 12152 mRNA_3784 0.27 -0.1