Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3745

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3744: 12112 - KOG0955 PHD finger protein BR140/LIN-49, at 479560 to 485967 12112 mRNA_3745: 12113 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 486209 to 486880 12113 mRNA_3746: 12114 - Hypothetical Protein, at 487127 to 488004 12114

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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485,451 + 0.7
485,460 + 1.1
485,872 - -0.4
485,895 + 1.3
485,901 + 0.1
486,072 - -1.1
486,346 - 12113 mRNA_3745 0.20 -0.6
486,937 - 0.1
486,965 + -1.0
487,072 - -2.1
487,090 - 0.5
487,231 - 12114 mRNA_3746 0.12 0.7
487,672 + 12114 mRNA_3746 0.62 0.3
487,797 + 12114 mRNA_3746 0.76 -1.4