Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3653

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3652: 12020 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 259462 to 260271 12020 mRNA_3653: 12021 - KOG2437 Muskelin, at 260397 to 263923 12021

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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259,431 - 0.6
259,459 + 0.4
259,576 - 12020 mRNA_3652 0.14 0.9
259,600 + 12020 mRNA_3652 0.17 -0.7
259,727 + 12020 mRNA_3652 0.33 0.1
259,736 - 12020 mRNA_3652 0.34 -1.1
259,766 + 12020 mRNA_3652 0.38 1.1
259,915 + 12020 mRNA_3652 0.56 0.1
260,019 + 12020 mRNA_3652 0.69 1.5
260,029 + 12020 mRNA_3652 0.70 -0.7
260,045 + 12020 mRNA_3652 0.72 -1.5
260,322 - 1.7
260,324 + -1.6
260,329 - 1.8
260,330 + 1.6
260,335 + -0.4
260,336 + 0.1
260,340 + -3.0
260,458 - -0.3
260,490 + -0.2
260,498 + -2.5
260,517 + -0.4
260,620 - -1.0
260,620 - -0.1
260,659 + -0.9
260,772 + 12021 mRNA_3653 0.11 -1.7
260,779 + 12021 mRNA_3653 0.11 1.2
260,781 + 12021 mRNA_3653 0.11 -0.5
260,787 + 12021 mRNA_3653 0.11 0.5
260,792 + 12021 mRNA_3653 0.11 -1.1
260,816 + 12021 mRNA_3653 0.12 0.2
260,928 - 12021 mRNA_3653 0.15 0.1
260,947 + 12021 mRNA_3653 0.16 -2.0
261,105 + 12021 mRNA_3653 0.20 0.7
261,479 + 12021 mRNA_3653 0.31 0.2
261,643 + 12021 mRNA_3653 0.35 -0.0
261,662 - 12021 mRNA_3653 0.36 -0.5
262,047 - 12021 mRNA_3653 0.47 -0.3
262,056 - 12021 mRNA_3653 0.47 1.1
262,325 + 12021 mRNA_3653 0.55 -0.6
262,481 - 12021 mRNA_3653 0.59 -0.7
262,768 + 12021 mRNA_3653 0.67 -0.5
263,042 - 12021 mRNA_3653 0.75 0.2
263,222 + 12021 mRNA_3653 0.80 0.3
263,645 - -1.5
263,805 + 0.5
263,816 + -0.1
263,914 + -0.3
263,930 + 0.1
263,944 - -1.1
264,093 + 1.0
264,098 + 0.0
264,106 + -1.6
264,108 + 0.2
264,110 + 0.1
264,117 + 0.4
264,122 + 1.5
264,169 - 0.8
264,308 - -0.3
264,312 - 0.5
264,325 - 0.6
264,332 + 0.3
264,332 - -1.4
264,334 + -1.0
264,399 - -0.9
264,459 + -0.3
264,462 + -1.2
264,466 - -0.1
264,466 - -0.7
264,467 + -0.4
264,479 - -0.9
264,575 - 0.1
264,585 - -0.5
264,599 + -0.8
264,599 - 0.4
264,601 + -0.2
264,603 + 1.6
264,619 - 1.2
264,633 - -0.3
264,656 + 0.3
264,668 - 1.8
264,744 - 1.4
264,829 - -0.2
264,891 + 0.6
264,897 - 0.0