Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3641

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3640: 12008 - ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966, at 229768 to 230624 12008 mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230658 to 231997 12009 mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232262 to 233977 12010

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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229,750 - 1.1
229,868 + 12008 mRNA_3640 0.12 1.4
229,870 - 12008 mRNA_3640 0.12 -0.3
229,872 - 12008 mRNA_3640 0.12 -1.0
230,158 - 12008 mRNA_3640 0.46 -0.9
230,176 + 12008 mRNA_3640 0.48 -0.9
230,185 - 12008 mRNA_3640 0.49 -0.8
230,218 - 12008 mRNA_3640 0.53 0.2
230,302 + 12008 mRNA_3640 0.62 -1.0
230,308 + 12008 mRNA_3640 0.63 0.1
230,474 + 12008 mRNA_3640 0.82 0.3
230,495 + 12008 mRNA_3640 0.85 1.9
230,587 + -0.4
230,605 + 0.7
230,630 + 0.4
230,658 - -1.0
230,915 + 12009 mRNA_3641 0.19 -3.0
231,185 + 12009 mRNA_3641 0.39 2.6
232,059 + 1.5
232,088 + -1.2
232,127 + 2.7
232,146 - 1.1
232,204 + -1.4
232,228 - 2.1