Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3608

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3607: 11975 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 159428 to 160353 11975 mRNA_3608: 11976 - Hypothetical Protein, at 161019 to 162088 11976 mRNA_3609: 11977 - K00235 SDHB, SDH2 succinate dehydrogenase (ubiquinone) iron-sulfur subunit, at 162464 to 163802 11977

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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160,202 + 11975 mRNA_3607 0.84 -0.4
160,222 + 11975 mRNA_3607 0.86 -0.1
160,470 - -0.7
160,508 + 0.1
160,515 - 0.4
160,686 + 1.2
160,813 - 0.0
161,184 - 11976 mRNA_3608 0.15 0.1
161,232 + 11976 mRNA_3608 0.20 -0.4
161,473 + 11976 mRNA_3608 0.42 -0.4
161,523 - 11976 mRNA_3608 0.47 -0.5
161,538 - 11976 mRNA_3608 0.49 -1.8
161,709 + 11976 mRNA_3608 0.64 0.8
161,826 + 11976 mRNA_3608 0.75 1.3
162,091 - 0.6
162,421 - -0.2