Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3512

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3511: 11879 - K10875 RAD54L, RAD54 DNA repair and recombination protein RAD54 and RAD54-like protein, at 270571 to 274030 11879 mRNA_3512: 11880 - K10873 RAD52 DNA repair and recombination protein RAD52, at 274074 to 276108 11880

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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273,945 + 1.3
274,402 + 11880 mRNA_3512 0.16 -0.1
274,438 + 11880 mRNA_3512 0.18 -1.7
274,546 - 11880 mRNA_3512 0.23 -0.3
274,660 + 11880 mRNA_3512 0.29 0.9
274,660 - 11880 mRNA_3512 0.29 -0.1
274,697 + 11880 mRNA_3512 0.31 0.2
274,699 - 11880 mRNA_3512 0.31 0.5
274,706 - 11880 mRNA_3512 0.31 -0.1
274,827 - 11880 mRNA_3512 0.37 -0.8
274,827 - 11880 mRNA_3512 0.37 0.5
274,854 + 11880 mRNA_3512 0.38 -0.2
275,724 - 11880 mRNA_3512 0.81 0.0
276,000 - 0.2
276,456 + -1.0
276,521 - 0.7
276,585 - 1.4
276,609 + 0.4
276,862 - -0.0