Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3503

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460 11870 mRNA_3503: 11871 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 251865 to 254204 11871

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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251,080 + 11870 mRNA_3502 0.34 0.8
251,513 + 0.1
251,519 - -2.0
251,530 - -0.6
251,644 - -2.7
251,652 + 1.9
251,682 + -1.8
251,774 - 1.3
251,989 - -0.7
252,403 + 11871 mRNA_3503 0.23 -0.1
252,430 + 11871 mRNA_3503 0.24 -0.6
252,683 + 11871 mRNA_3503 0.35 -0.1
252,733 - 11871 mRNA_3503 0.37 -0.3
253,030 + 11871 mRNA_3503 0.50 2.4
253,149 + 11871 mRNA_3503 0.55 1.2
253,279 + 11871 mRNA_3503 0.60 0.0
253,586 + 11871 mRNA_3503 0.74 0.9
253,767 + 11871 mRNA_3503 0.81 -0.8
253,864 - 11871 mRNA_3503 0.85 -0.2
254,176 - -0.5
254,200 - 0.0
254,314 + 0.4
254,320 + 1.8
254,450 - 0.3
254,542 + 0.3
254,630 - 0.3
254,645 + -1.2
254,893 - 0.3
255,001 - -0.1
255,039 + -1.5
255,048 - 0.0
255,169 - 1.7