Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3500

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243095 to 244996 11867 mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245700 to 248074 11868 mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248480 to 250835 11869

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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245,132 - -0.4
245,138 - 0.9
245,138 - -2.0
245,220 - 2.1
245,228 + -1.3
245,235 - -0.5
245,241 + 0.2
245,248 - -0.1
245,258 + 0.2
247,785 + 11868 mRNA_3500 0.88 2.4
247,880 - 0.5
248,273 - 0.3
248,491 - -3.1
248,520 - -0.1
248,614 - 0.8
248,710 - 0.3
248,923 - 11869 mRNA_3501 0.19 -1.7