Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3425

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3424: 11792 - Hypothetical Protein, at 64972 to 67736 11792 mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67905 to 69207 11793 mRNA_3426: 11794 - K08498 STX6 syntaxin 6, at 69287 to 70405 11794

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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67,038 - 11792 mRNA_3424 0.75 -1.1
67,090 - 11792 mRNA_3424 0.77 -0.4
67,372 - 11792 mRNA_3424 0.87 -0.2
67,477 - -0.3
67,491 - -0.5
67,504 + 0.4
67,663 + 0.2
67,927 - 1.5
68,074 + 11793 mRNA_3425 0.13 -1.0
68,118 + 11793 mRNA_3425 0.16 0.0
68,236 - 11793 mRNA_3425 0.25 1.1
68,610 + 11793 mRNA_3425 0.54 -2.0
68,785 + 11793 mRNA_3425 0.68 -0.1
68,918 + 11793 mRNA_3425 0.78 0.7
68,932 + 11793 mRNA_3425 0.79 -0.9
68,942 - 11793 mRNA_3425 0.80 -0.6
68,969 - 11793 mRNA_3425 0.82 -2.7
69,111 + 0.0
69,117 + -0.3
69,130 - -1.6
69,134 + -0.2
69,153 + -1.7
69,254 + 2.0
69,257 + 3.2
69,423 - 11794 mRNA_3426 0.12 -1.3
69,569 - 11794 mRNA_3426 0.25 0.1
69,581 - 11794 mRNA_3426 0.26 -1.5
69,728 + 11794 mRNA_3426 0.39 -1.3
69,813 - 11794 mRNA_3426 0.47 0.3
69,820 + 11794 mRNA_3426 0.48 -2.6
69,867 + 11794 mRNA_3426 0.52 0.2
69,896 - 11794 mRNA_3426 0.54 -0.4
69,896 - 11794 mRNA_3426 0.54 -0.2
69,909 + 11794 mRNA_3426 0.56 1.8