Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3413

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3412: 11780 - KOG0548 Molecular co-chaperone STI1, at 32248 to 34426 11780 mRNA_3413: 11781 - K00622 nat arylamine N-acetyltransferase, at 34768 to 35867 11781 mRNA_3414: 11782 - Hypothetical Protein, at 36358 to 36969 11782

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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34,439 + -0.7
34,439 + 2.2
34,456 - -0.7
34,577 - -0.3
34,589 + 0.3
34,596 + -1.7
34,733 - 0.8
34,737 + -1.1
34,747 - 1.2
34,862 + -0.4
34,873 + -0.6
34,879 + 11781 mRNA_3413 0.10 -0.4
34,893 + 11781 mRNA_3413 0.11 -0.9
34,895 - 11781 mRNA_3413 0.12 2.8
34,903 + 11781 mRNA_3413 0.12 1.0
35,019 - 11781 mRNA_3413 0.23 -1.8
35,184 - 11781 mRNA_3413 0.38 -1.0
35,303 - 11781 mRNA_3413 0.49 1.8
36,435 + 11782 mRNA_3414 0.13 1.8
36,805 + 11782 mRNA_3414 0.73 -0.5