Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3324

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3323: 11691 - HMMPfam-RTA1 like protein-PF04479, at 395494 to 396830 11691 mRNA_3324: 11692 - HMMPfam-RTA1 like protein-PF04479, at 397238 to 398541 11692 mRNA_3325: 11693 - Hypothetical Protein, at 398718 to 399832 11693

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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396,275 - 11691 mRNA_3323 0.58 -0.4
396,446 + 11691 mRNA_3323 0.71 1.0
396,581 + 11691 mRNA_3323 0.81 -2.2
396,998 + -1.9
397,010 - 0.1
397,011 - -1.4
397,052 + 0.7
397,151 - 1.6
397,170 - -0.2
397,173 + -0.9
397,182 - 0.6
397,196 + 0.2
397,296 - -0.6
397,723 - 11692 mRNA_3324 0.37 -2.1
398,171 - 11692 mRNA_3324 0.72 -0.7
398,741 - 0.3
398,864 - 11693 mRNA_3325 0.13 -1.3
398,894 + 11693 mRNA_3325 0.16 0.6