Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3246

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3246: 11614 - Hypothetical Protein, at 205429 to 207188 11614 mRNA_3247: 11615 - Hypothetical Protein, at 207586 to 209247 11615

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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204,437 - -0.3
204,443 - 2.4
204,445 + 1.3
204,447 - 1.0
204,448 + 0.9
204,448 - 0.5
204,454 + 0.0
204,454 + -0.2
204,455 - 1.0
204,463 + 1.3
204,468 - -1.8
204,473 + -0.8
204,479 + 1.7
204,484 - 2.2
204,491 - -0.1
204,511 - -1.2
204,528 - -0.8
204,534 - -1.9
204,547 - -0.7
204,557 + 1.0
204,639 + -1.4
204,647 + 0.4
204,652 - 0.1
204,654 + -0.7
204,664 - -0.8
204,665 + -0.4
204,678 + -0.7
204,695 + 0.4
204,699 + 0.3
204,724 - 3.1
204,727 + 0.2
204,801 - -3.9
204,811 + -1.2
204,826 + -2.6
204,957 - 0.8
205,112 + -0.6
205,123 + 0.8
205,258 + -1.3
205,351 + 1.3
205,379 - 0.3
205,534 + 1.8
205,548 - 0.2
205,821 + 11614 mRNA_3246 0.22 0.1
205,842 - 11614 mRNA_3246 0.23 1.5
205,853 + 11614 mRNA_3246 0.24 -0.4
206,075 + 11614 mRNA_3246 0.37 0.7
206,250 - 11614 mRNA_3246 0.47 -3.4
206,282 + 11614 mRNA_3246 0.48 0.1
206,716 - 11614 mRNA_3246 0.73 0.5
206,970 - 11614 mRNA_3246 0.88 -0.9
206,989 + 11614 mRNA_3246 0.89 -0.1
207,159 - -0.3
207,285 - -0.5
207,317 + -1.4
207,327 - -0.6
207,356 + 0.2
207,427 - 0.9
207,605 - 0.1
207,618 - -0.9
207,634 + -2.5
207,730 + 0.7
207,734 + -0.8
207,865 - 11615 mRNA_3247 0.17 -0.5
207,926 - 11615 mRNA_3247 0.20 0.4
207,984 + 11615 mRNA_3247 0.24 2.2
208,012 + 11615 mRNA_3247 0.26 -1.5