Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3066

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3065: 11433 - Hypothetical Protein, at 230805 to 232101 11433 mRNA_3066: 11434 - K13449 PR1 pathogenesis-related protein 1, at 232396 to 233465 11434

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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231,459 - 11433 mRNA_3065 0.50 -0.6
231,461 - 11433 mRNA_3065 0.51 0.4
231,465 - 11433 mRNA_3065 0.51 0.1
231,467 + 11433 mRNA_3065 0.51 0.4
231,468 + 11433 mRNA_3065 0.51 0.5
231,489 + 11433 mRNA_3065 0.53 -0.8
231,592 + 11433 mRNA_3065 0.61 0.6
231,632 + 11433 mRNA_3065 0.64 0.1
231,752 + 11433 mRNA_3065 0.73 -0.5
231,758 + 11433 mRNA_3065 0.73 0.3
231,764 + 11433 mRNA_3065 0.74 0.5
231,771 + 11433 mRNA_3065 0.74 0.6
231,778 - 11433 mRNA_3065 0.75 -1.3
231,780 - 11433 mRNA_3065 0.75 0.3
231,783 + 11433 mRNA_3065 0.75 -0.8
231,911 - 11433 mRNA_3065 0.85 0.1
231,924 + 11433 mRNA_3065 0.86 -1.1
231,927 + 11433 mRNA_3065 0.87 -1.2
231,948 + 11433 mRNA_3065 0.88 -0.4
232,071 - 0.6
232,072 - 0.0
232,086 + -0.3
232,178 - 0.1
232,205 - -1.0
232,227 - 0.1
232,384 - 0.1
232,516 - 11434 mRNA_3066 0.11 1.0
232,656 + 11434 mRNA_3066 0.24 0.4
232,659 - 11434 mRNA_3066 0.25 0.9
232,951 - 11434 mRNA_3066 0.52 0.9
232,952 - 11434 mRNA_3066 0.52 -1.3
233,123 - 11434 mRNA_3066 0.68 1.1
233,207 - 11434 mRNA_3066 0.76 3.6
233,430 + 0.6
233,546 - 2.3
233,573 - 0.1
233,713 + -0.2
233,788 - -0.7
233,817 + 0.3
233,827 + 0.0
233,828 - -0.4
233,829 - 1.3
233,837 + 0.2
233,844 + -0.6
233,853 - 0.3
233,854 + -1.1
233,865 - -0.3
233,865 - 2.0
233,899 + -1.8
233,937 - -1.5
233,940 - 2.3
233,943 + -1.0
233,947 - 0.8
233,948 - -0.0
233,949 - -1.7
233,951 - -1.5
233,952 - -0.8
233,956 - -2.1
233,957 + -3.3
233,966 - -0.2
233,968 - -0.4
233,968 - 1.7
233,969 - 2.1
233,971 + -0.9
233,971 + 0.8
233,972 - 0.3
233,979 - -0.4
233,986 + 0.6
234,005 - -0.4
234,010 + -0.6
234,013 + -0.5
234,018 - 1.7
234,021 + -0.5
234,024 - 0.3
234,035 - -0.1
234,069 - 0.5
234,069 - -0.0
234,080 - 1.2
234,082 - -0.8
234,086 - 0.3
234,095 - -0.5
234,097 - -2.7
234,109 + 1.6
234,109 - 0.4
234,118 - 0.4
234,121 + -0.7
234,126 - 0.4
234,132 - -0.9
234,148 - 1.4
234,157 + -0.2
234,250 - 0.6
234,271 - 3.1
234,314 + 1.2
234,413 - 0.5
234,424 - 0.1
234,453 - -0.1
234,455 - 0.1