Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2972

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2971: 11339 - HMMPfam-Anp1-PF03452,SUPERFAMILY--SSF53448, at 684112 to 685866 11339 mRNA_2972: 11340 - K03850 ALG10 alpha-1,2-glucosyltransferase, at 686136 to 688131 11340 mRNA_2973: 11341 - K11996 MOCS3, UBA4 adenylyltransferase and sulfurtransferase, at 688176 to 690178 11341

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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685,174 - 11339 mRNA_2971 0.61 1.2
685,357 - 11339 mRNA_2971 0.71 0.8
685,368 + 11339 mRNA_2971 0.72 -0.8
685,374 - 11339 mRNA_2971 0.72 1.2
685,392 + 11339 mRNA_2971 0.73 0.8
685,496 - 11339 mRNA_2971 0.79 0.8
685,536 + 11339 mRNA_2971 0.81 0.3
685,597 + 11339 mRNA_2971 0.85 -0.7
685,598 + 11339 mRNA_2971 0.85 -0.7
685,599 - 11339 mRNA_2971 0.85 0.4
685,601 - 11339 mRNA_2971 0.85 0.8
685,601 - 11339 mRNA_2971 0.85 0.2
685,641 - 11339 mRNA_2971 0.87 0.4
685,687 - 11339 mRNA_2971 0.90 -1.6
685,688 - 11339 mRNA_2971 0.90 0.5
685,697 - -0.9
685,756 - 0.4
685,778 + -0.4
685,785 + 0.4
685,801 - -0.3
685,812 + -1.9
685,854 + 2.4
685,905 - 1.0
685,958 + -0.5
685,967 + 0.2
685,974 - 0.4
686,118 - 0.2
686,119 - 0.3
686,164 + 1.2
686,164 + 1.1
686,218 - 0.2
686,221 - -1.0
686,281 - -1.2
686,286 + 0.4
686,460 + 11340 mRNA_2972 0.16 1.3
686,503 - 11340 mRNA_2972 0.18 -0.4
686,542 + 11340 mRNA_2972 0.20 2.4
686,744 - 11340 mRNA_2972 0.30 -1.8
686,903 + 11340 mRNA_2972 0.38 -0.6
686,951 - 11340 mRNA_2972 0.41 -0.9
687,136 + 11340 mRNA_2972 0.50 1.3
687,152 + 11340 mRNA_2972 0.51 -0.4
687,175 + 11340 mRNA_2972 0.52 1.8
687,175 + 11340 mRNA_2972 0.52 -0.0
687,292 + 11340 mRNA_2972 0.58 -0.1
687,292 + 11340 mRNA_2972 0.58 1.1
687,292 + 11340 mRNA_2972 0.58 0.5
687,304 + 11340 mRNA_2972 0.59 -0.2
687,325 + 11340 mRNA_2972 0.60 -0.7
687,328 - 11340 mRNA_2972 0.60 -1.1
687,329 + 11340 mRNA_2972 0.60 1.0
687,408 + 11340 mRNA_2972 0.64 -0.8
687,411 + 11340 mRNA_2972 0.64 -1.8
687,577 - 11340 mRNA_2972 0.72 -0.1
687,577 - 11340 mRNA_2972 0.72 0.6
687,594 + 11340 mRNA_2972 0.73 -3.4
687,595 - 11340 mRNA_2972 0.73 2.2
687,599 - 11340 mRNA_2972 0.73 -0.2
687,607 - 11340 mRNA_2972 0.74 -0.1
687,708 - 11340 mRNA_2972 0.79 1.2
687,763 - 11340 mRNA_2972 0.82 -1.2
687,763 - 11340 mRNA_2972 0.82 -0.6
687,766 + 11340 mRNA_2972 0.82 3.3
688,004 - 0.6
688,004 - 1.1
688,018 - 0.0
688,031 + 0.5
688,165 + 1.3
688,288 - 0.2
688,289 - 0.2
688,496 + 11341 mRNA_2973 0.16 0.7
688,575 - 11341 mRNA_2973 0.20 -1.3
688,585 + 11341 mRNA_2973 0.20 -0.7
688,756 - 11341 mRNA_2973 0.29 1.2
688,901 + 11341 mRNA_2973 0.36 1.3
689,008 - 11341 mRNA_2973 0.42 0.8