Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2921

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2920: 11288 - KOG2234 Predicted UDP-galactose transporter, at 558435 to 560436 11288 mRNA_2921: 11289 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 560845 to 562189 11289

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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559,895 + 11288 mRNA_2920 0.73 1.7
560,191 + 11288 mRNA_2920 0.88 1.0
560,339 - 1.8
560,623 - -0.2
560,628 - -0.2
560,657 - -1.4
560,965 + -0.4
560,990 + 11289 mRNA_2921 0.11 -0.6
561,205 + 11289 mRNA_2921 0.27 -0.2
561,241 + 11289 mRNA_2921 0.29 -0.2
561,330 - 11289 mRNA_2921 0.36 -0.3
561,395 + 11289 mRNA_2921 0.41 2.3
561,674 - 11289 mRNA_2921 0.62 0.5
562,398 - -0.2
562,419 - -0.6
562,527 + -0.0
562,530 + 0.2
562,534 - -0.3
562,601 - 1.1
562,603 + -0.4
562,644 - 0.4
562,665 + -0.2
562,705 - 2.9
562,839 + -0.9
562,841 - 0.2
562,852 + -2.1
562,854 + -2.5
562,875 + -0.0
562,882 - -0.2
562,891 + -1.6
562,994 + -0.7
563,000 + -1.1
563,090 - 0.3
563,126 + -0.4
563,150 + 0.6
563,178 + -1.4