Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2880

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2880: 11248 - K10531 pvdA L-ornithine N5-oxygenase, at 436140 to 438445 11248 mRNA_2881: 11249 - KOG0254 Predicted transporter (major facilitator superfamily), at 439393 to 442330 11249

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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435,639 + 1.0
435,681 - 0.1
435,712 + 1.3
435,719 - -0.8
435,735 - 0.4
435,767 + -0.2
435,857 + -1.0
435,875 + -0.1
435,880 + 0.4
435,947 + -0.7
435,948 - -1.9
436,005 - 0.2
436,012 - -0.1
436,014 + -2.1
436,016 + 1.9
436,023 + -0.3
436,040 - -1.4
436,049 - -2.3
436,058 - -0.4
436,058 + -0.8
436,060 + 0.1
436,063 + -0.4
436,084 - -0.3
436,088 + 0.7
436,185 - -0.8
436,215 - 0.5
436,224 - 0.2
436,225 - 0.5
436,248 + 0.9
436,340 - -1.3
436,357 + -0.2
436,390 + 11248 mRNA_2880 0.11 -1.2
436,514 + 11248 mRNA_2880 0.16 0.6
436,540 - 11248 mRNA_2880 0.17 0.3
436,563 + 11248 mRNA_2880 0.18 1.3
436,576 + 11248 mRNA_2880 0.19 -1.6
436,583 - 11248 mRNA_2880 0.19 0.5
436,584 + 11248 mRNA_2880 0.19 1.3
436,611 + 11248 mRNA_2880 0.20 0.5
436,617 - 11248 mRNA_2880 0.21 -0.2
436,674 - 11248 mRNA_2880 0.23 1.3
436,690 - 11248 mRNA_2880 0.24 0.4
436,699 + 11248 mRNA_2880 0.24 -1.1
436,706 + 11248 mRNA_2880 0.25 0.4
436,706 - 11248 mRNA_2880 0.25 -0.1
436,711 - 11248 mRNA_2880 0.25 -0.6
436,799 + 11248 mRNA_2880 0.29 0.1
436,849 - 11248 mRNA_2880 0.31 -0.3
437,158 - 11248 mRNA_2880 0.44 -1.2
437,211 + 11248 mRNA_2880 0.46 -2.4
437,289 - 11248 mRNA_2880 0.50 1.5
437,502 - 11248 mRNA_2880 0.59 -0.5
437,510 + 11248 mRNA_2880 0.59 -0.3
437,602 - 11248 mRNA_2880 0.63 1.3
437,952 + 11248 mRNA_2880 0.79 1.2
437,964 - 11248 mRNA_2880 0.79 1.7
438,115 - 11248 mRNA_2880 0.86 -0.2
438,366 - 0.0
438,379 - 1.5
438,391 - 1.6
438,405 + -0.7
438,415 + -0.1
438,514 + -0.4
438,519 - 0.8
438,667 - -1.0
438,669 + -1.7
438,702 - -0.3
438,785 - -0.7
438,790 + 0.0
438,816 + -0.1
438,932 - -1.0
438,940 - 0.6
438,954 + 3.0
438,966 - -1.2
438,970 + 0.8
438,972 + 0.8
438,972 + -0.2
438,973 - 0.0
438,976 - -1.2
438,977 - 0.0
438,979 - 1.8
439,006 - -0.8
439,006 - 0.7
439,006 - -1.1
439,020 + 1.1
439,020 - 0.1
439,023 + -1.6
439,031 - 1.1
439,038 - 0.2
439,038 - 1.0
439,039 - -2.2
439,039 - -0.9
439,054 + 0.0
439,111 + -0.0
439,121 - 0.6
439,138 - 1.9
439,231 - -2.9
439,233 - 0.2
439,237 + -0.2
439,242 + -0.4
439,243 - -0.2
439,246 - -0.3
439,257 + -0.4
439,275 + -0.5
439,275 - 0.4
439,284 + 1.2
439,296 + 0.2
439,322 - -0.7
439,326 - -0.3
439,330 + -1.0
439,336 + 0.5
439,337 - -0.7
439,353 + 0.2
439,375 - 2.1