Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2851

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2850: 11218 - SUPERFAMILY--SSF52047, at 360186 to 362999 11218 mRNA_2851: 11219 - SUPERFAMILY--SSF52047, at 363401 to 364630 11219 mRNA_2852: 11220 - K01164 POP1 ribonuclease P/MRP protein subunit POP1, at 364901 to 367915 11220

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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362,613 + 11218 mRNA_2850 0.86 0.7
362,774 + 0.6
363,004 - 0.5
363,232 + -0.4
363,336 + -0.5
363,337 + 0.3
363,348 - -1.1
363,364 - -0.6
363,564 - 11219 mRNA_2851 0.13 2.0
363,631 + 11219 mRNA_2851 0.19 1.0
363,634 + 11219 mRNA_2851 0.19 -2.2
363,676 + 11219 mRNA_2851 0.22 2.0
364,108 + 11219 mRNA_2851 0.57 0.8
364,118 - 11219 mRNA_2851 0.58 0.3
364,241 - 11219 mRNA_2851 0.68 0.1
364,246 + 11219 mRNA_2851 0.69 -0.6
364,351 - 11219 mRNA_2851 0.77 -0.7
364,375 + 11219 mRNA_2851 0.79 -0.2
364,380 - 11219 mRNA_2851 0.80 0.2
364,515 - -0.6
364,606 + -0.7
364,669 + -0.4
364,807 - -0.6
364,809 - -0.2
364,811 - -1.7
364,820 - -0.5
364,831 + -0.9
364,924 - 1.0