Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2741

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2740: 11108 - HMMPfam-SUR7/PalI family-PF06687, at 113053 to 114206 11108 mRNA_2741: 11109 - HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249, at 114533 to 117473 11109 mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117665 to 118794 11110

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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113,726 - 11108 mRNA_2740 0.58 -0.5
114,001 + 11108 mRNA_2740 0.82 -0.7
114,005 - 11108 mRNA_2740 0.82 0.2
114,344 + -1.5
114,423 + 1.2
114,528 + 0.2
114,935 - 11109 mRNA_2741 0.14 0.7
117,610 - 0.2
117,714 - -0.0
117,877 + 11110 mRNA_2742 0.19 1.5
117,888 - 11110 mRNA_2742 0.20 -0.4