Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2707

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2706: 11074 - HMMPfam-PLAC8 family-PF04749,TIGRFAM-A_thal_Cys_rich uncharacterized Cys-rich domain-TIGR01571, at 47300 to 48078 11074 mRNA_2707: 11075 - KOG0254 Predicted transporter (major facilitator superfamily), at 48524 to 50718 11075

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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47,582 + 11074 mRNA_2706 0.36 3.2
47,717 + 11074 mRNA_2706 0.54 0.0
47,950 - 11074 mRNA_2706 0.83 0.7
47,966 + 11074 mRNA_2706 0.85 -1.2
48,263 + -1.2
48,325 - 0.2
48,540 + -0.3
48,700 - 1.0
49,112 + 11075 mRNA_2707 0.27 -0.3
49,249 + 11075 mRNA_2707 0.33 1.2
49,360 + 11075 mRNA_2707 0.38 0.4
49,380 - 11075 mRNA_2707 0.39 1.9
49,408 + 11075 mRNA_2707 0.40 1.0
49,687 - 11075 mRNA_2707 0.53 0.7
49,700 - 11075 mRNA_2707 0.54 2.1
49,706 + 11075 mRNA_2707 0.54 1.6
49,810 - 11075 mRNA_2707 0.59 -0.8
49,967 + 11075 mRNA_2707 0.66 0.3
50,124 - 11075 mRNA_2707 0.73 -1.2
50,294 - 11075 mRNA_2707 0.81 3.7
50,377 - 11075 mRNA_2707 0.84 -2.3
50,406 + 11075 mRNA_2707 0.86 0.9
50,429 - 11075 mRNA_2707 0.87 2.0
50,442 - 11075 mRNA_2707 0.87 2.3
50,546 - -0.0
50,552 - 2.2
50,701 - 1.9
50,812 - 1.3
50,826 - 0.4
50,855 - 0.7
50,856 - 0.7
50,857 - 1.0
50,861 + 1.0
50,874 - 0.9
50,875 - 0.9
50,877 - 1.2
50,912 + 0.3
51,005 - 1.2
51,018 - 0.3
51,025 + 0.2
51,027 + 2.0
51,043 + 0.0
51,050 + 0.2
51,050 + 0.7
51,058 + 0.1
51,062 + 1.3
51,080 - 1.1
51,086 - -0.0
51,116 - -0.8
51,171 - -1.3
51,183 - 0.2
51,188 + -0.5
51,190 + 0.0
51,346 + 0.6
51,489 - -0.0
51,522 - -1.6
51,711 + 0.4