Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2679

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2678: 11046 - KOG3102 Uncharacterized conserved protein, at 758219 to 759317 11046 mRNA_2679: 11047 - K14262 DUG2 di- and tripeptidase, at 759389 to 763569 11047 mRNA_2680: 11048 - Hypothetical Protein, at 764065 to 765232 11048

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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758,407 + 11046 mRNA_2678 0.17 1.2
758,710 - 11046 mRNA_2678 0.45 -0.6
758,793 + 11046 mRNA_2678 0.52 0.7
759,076 + 11046 mRNA_2678 0.78 0.8
759,078 - 11046 mRNA_2678 0.78 -0.3
759,176 + 11046 mRNA_2678 0.87 0.7
759,239 + 2.3
759,241 + -0.0
759,271 + -0.1
759,271 + -0.4
759,383 - -0.6
759,421 + 2.4
759,517 + -0.1
759,811 - 11047 mRNA_2679 0.10 1.4
759,835 + 11047 mRNA_2679 0.11 -1.3
759,855 + 11047 mRNA_2679 0.11 0.5
759,940 - 11047 mRNA_2679 0.13 2.9
759,941 + 11047 mRNA_2679 0.13 1.2
760,064 - 11047 mRNA_2679 0.16 0.2
760,100 - 11047 mRNA_2679 0.17 -0.3
760,117 + 11047 mRNA_2679 0.17 -0.6
760,244 + 11047 mRNA_2679 0.20 0.7
760,423 - 11047 mRNA_2679 0.25 -0.7
760,604 - 11047 mRNA_2679 0.29 0.4
760,853 - 11047 mRNA_2679 0.35 0.5
760,871 + 11047 mRNA_2679 0.35 0.2
761,398 - 11047 mRNA_2679 0.48 -0.2
761,398 - 11047 mRNA_2679 0.48 -0.6
761,452 + 11047 mRNA_2679 0.49 -0.9
761,557 - 11047 mRNA_2679 0.52 -0.7
762,322 + 11047 mRNA_2679 0.70 -2.5
762,495 - 11047 mRNA_2679 0.74 1.4
762,630 + 11047 mRNA_2679 0.78 1.1
762,689 - 11047 mRNA_2679 0.79 2.3
762,737 + 11047 mRNA_2679 0.80 0.5
762,920 - 11047 mRNA_2679 0.84 -0.6
763,036 - 11047 mRNA_2679 0.87 -0.7
763,041 + 11047 mRNA_2679 0.87 0.4
763,175 + 0.5
763,187 + -0.6
763,314 - 1.5
763,333 - -0.4
763,484 + 0.2
763,490 + -2.1
763,530 + 2.0
763,628 + 2.8
763,629 + -0.9
763,684 + 0.5
763,755 + 0.4
763,767 - 1.2
763,789 - 2.1
763,932 - 0.7
764,075 - -0.8
764,105 - -2.8
764,111 + -0.5
764,269 + 11048 mRNA_2680 0.17 0.9
764,478 - 11048 mRNA_2680 0.35 0.1
764,489 - 11048 mRNA_2680 0.36 -1.3
764,490 - 11048 mRNA_2680 0.36 -2.0
764,532 + 11048 mRNA_2680 0.40 -1.0