Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2670

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2669: 11037 - Hypothetical Protein, at 722649 to 723844 11037 mRNA_2670: 11038 - SUPERFAMILY--SSF52058, at 724183 to 725340 11038 mRNA_2671: 11039 - K00111 glpA, glpD glycerol-3-phosphate dehydrogenase, at 726293 to 729723 11039

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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723,423 - 11037 mRNA_2669 0.65 0.5
723,524 - 11037 mRNA_2669 0.73 -0.7
723,566 - 11037 mRNA_2669 0.77 1.4
723,572 + 11037 mRNA_2669 0.77 1.1
723,587 + 11037 mRNA_2669 0.78 0.7
723,674 + 11037 mRNA_2669 0.86 0.6
723,718 - 11037 mRNA_2669 0.89 1.3
723,729 + -1.6
723,744 + -1.2
723,868 + 0.3
723,882 - 0.0
723,882 - -1.2
723,886 - 1.2
723,886 - -0.6
724,086 + 0.8
724,089 + 1.7
724,220 - 0.2
724,229 + 1.5
724,230 + 0.1
724,683 + 11038 mRNA_2670 0.43 -1.4
724,791 + 11038 mRNA_2670 0.53 1.4
725,372 + -0.3
725,398 + 0.2
725,400 + -0.0
725,457 - 0.3
725,590 + 0.1
725,602 + -0.4
725,745 - -0.6
725,753 + 0.2
725,765 - 0.6
725,773 + 2.3
725,774 - 1.5
725,783 + 0.2
725,800 + -0.5
725,807 + 3.2
725,814 - -1.0
725,843 - 0.6
725,879 + -0.2
725,879 + 0.0
726,006 + 1.0
726,029 + -3.2
726,045 + -0.2
726,203 + -0.5