Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2605

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2604: 10972 - BLAST Esterase, SGNH hydrolase-type domain protein [Rho..., at 575232 to 576935 10972 mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577060 to 580725 10973 mRNA_2606: 10974 - Hypothetical Protein, at 581408 to 582467 10974

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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576,119 - 10972 mRNA_2604 0.52 1.4
576,370 + 10972 mRNA_2604 0.67 1.4
576,557 + 10972 mRNA_2604 0.78 1.1
576,836 + -0.8
576,973 + -0.2
576,974 - 1.2
576,975 + -0.3
576,978 - 0.7
576,995 + -0.1
576,996 + -2.1
576,999 + -0.3
576,999 + 0.5
577,002 - -0.5
577,003 + 0.1
577,007 + 0.6
577,008 + -0.1
577,013 - -0.1
577,022 + -0.1
577,144 + -1.2
577,147 - -2.2
577,148 - -0.3
577,151 - -0.7
577,152 + -1.1
577,156 - -2.0
577,159 + 0.2
577,288 - 1.1
577,301 + 0.8
577,305 + 1.3
577,322 + 0.5
577,438 - 10973 mRNA_2605 0.10 -0.3
577,468 - 10973 mRNA_2605 0.11 -1.6
577,589 - 10973 mRNA_2605 0.14 0.7
577,589 - 10973 mRNA_2605 0.14 0.5
577,598 + 10973 mRNA_2605 0.15 -0.2
577,628 + 10973 mRNA_2605 0.15 -0.3
577,693 - 10973 mRNA_2605 0.17 -2.0
577,718 + 10973 mRNA_2605 0.18 -2.2
577,726 + 10973 mRNA_2605 0.18 1.4
578,052 - 10973 mRNA_2605 0.27 0.2
578,052 + 10973 mRNA_2605 0.27 -0.5
578,168 + 10973 mRNA_2605 0.30 2.3
578,443 - 10973 mRNA_2605 0.38 -1.4
578,604 + 10973 mRNA_2605 0.42 -1.5
578,612 - 10973 mRNA_2605 0.42 2.2
578,622 - 10973 mRNA_2605 0.43 -0.7
578,748 - 10973 mRNA_2605 0.46 -0.4
578,767 - 10973 mRNA_2605 0.47 -0.1
578,790 + 10973 mRNA_2605 0.47 1.0
578,817 + 10973 mRNA_2605 0.48 1.0
578,906 - 10973 mRNA_2605 0.50 -1.4
578,952 + 10973 mRNA_2605 0.52 0.4
579,038 - 10973 mRNA_2605 0.54 -1.0
579,060 + 10973 mRNA_2605 0.55 -0.8
579,172 + 10973 mRNA_2605 0.58 -0.7
579,214 + 10973 mRNA_2605 0.59 -0.1
579,219 + 10973 mRNA_2605 0.59 0.9
579,346 - 10973 mRNA_2605 0.62 0.5
579,541 - 10973 mRNA_2605 0.68 -2.0
579,804 + 10973 mRNA_2605 0.75 1.4
579,951 + 10973 mRNA_2605 0.79 0.2
579,952 - 10973 mRNA_2605 0.79 1.7
579,959 + 10973 mRNA_2605 0.79 -0.2
580,201 - 10973 mRNA_2605 0.86 0.7
580,229 - 10973 mRNA_2605 0.86 0.2
580,263 + 10973 mRNA_2605 0.87 0.5
580,300 - 10973 mRNA_2605 0.88 0.9
580,561 - -2.3
580,687 + -1.1
580,693 + -0.7
580,695 + 0.1
580,793 - 1.0
580,849 + -0.5
580,938 + -1.2
580,974 + -1.2
580,981 - 2.2
580,985 + 2.0
580,997 + 0.4
581,004 + 0.0
581,111 - -1.5
581,126 - 0.3
581,275 - 0.0
581,275 + 1.0
581,440 - -1.4
581,722 + 10974 mRNA_2606 0.30 0.8
581,725 - 10974 mRNA_2606 0.30 -0.8