Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2600

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2599: 10967 - KOG2619 Fucosyltransferase, at 567541 to 568045 10967 mRNA_2600: 10968 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 568894 to 570450 10968 mRNA_2601: 10969 - Hypothetical Protein, at 570670 to 572190 10969

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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568,000 + -0.5
568,116 - -0.1
568,138 - 2.6
568,143 - -0.0
568,152 - 1.1
568,154 + 1.1
568,175 + 0.2
568,177 - 1.0
568,179 - -1.1
568,181 - -0.7
568,185 + 1.0
568,190 - 0.1
568,197 + -0.1
568,201 - -0.6
568,205 - -1.9
568,216 + -0.7
568,297 - -0.6
568,306 - 0.1
568,317 - 2.5
568,331 + -0.9
568,353 - -1.2
568,361 - 1.0
568,414 - 0.0
568,453 + -0.8
568,498 - -0.9
568,587 - -0.3
568,782 - -1.1
568,783 + 0.9
568,904 - -0.9
568,932 + 0.0
568,946 - -0.5
568,948 - -0.5
568,951 + -0.2
568,957 + -1.1
568,957 + -0.3
568,958 - -0.2
568,958 - -0.6
568,964 - -0.0
568,965 + -0.5
568,968 + 0.4
568,968 - -1.4
568,971 + 0.3
568,971 + -0.6
568,971 + 0.5
568,971 - -1.7
568,971 + -0.4
568,971 + 0.8
568,975 - -0.8
568,976 + 0.9
568,978 + 0.7
568,980 + 0.8
568,983 - 1.3
568,984 - -2.2
568,986 + 0.4
568,986 - -0.0
568,990 - -0.6
568,990 + 1.3
568,992 - -0.5
568,993 + -0.4
568,993 + 0.2
568,994 + -0.4
568,996 + -1.0
568,997 + 1.7
568,997 + 0.1
568,999 + 0.1
569,002 + -1.2
569,004 + 0.3
569,006 + -0.2
569,018 - 0.9
569,163 - 10968 mRNA_2600 0.17 0.5
569,166 + 10968 mRNA_2600 0.17 1.9
569,168 + 10968 mRNA_2600 0.18 0.3
569,168 + 10968 mRNA_2600 0.18 0.6
569,281 + 10968 mRNA_2600 0.25 -0.9
569,301 + 10968 mRNA_2600 0.26 -0.0
569,461 + 10968 mRNA_2600 0.36 -0.3
569,467 + 10968 mRNA_2600 0.37 -0.7
569,475 - 10968 mRNA_2600 0.37 -1.4
569,730 - 10968 mRNA_2600 0.54 -0.7
569,747 + 10968 mRNA_2600 0.55 -0.2
570,162 + 10968 mRNA_2600 0.81 0.3
570,188 - 10968 mRNA_2600 0.83 -0.3
570,465 - -0.7
570,472 - -0.1
570,552 + -1.6
570,598 - 0.9
570,626 + -1.6
570,777 - 0.3
570,914 - 10969 mRNA_2601 0.16 -1.6
570,917 + 10969 mRNA_2601 0.16 -0.2
570,919 - 10969 mRNA_2601 0.16 -0.1
570,926 + 10969 mRNA_2601 0.17 -0.6
571,048 + 10969 mRNA_2601 0.25 0.7
571,058 + 10969 mRNA_2601 0.26 0.5
571,070 + 10969 mRNA_2601 0.26 -0.1
571,197 - 10969 mRNA_2601 0.35 -2.3
571,219 + 10969 mRNA_2601 0.36 -0.2