Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2569

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2568: 10936 - KOG2504 Monocarboxylate transporter, at 463556 to 465484 10936 mRNA_2569: 10937 - K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 466083 to 468142 10937 mRNA_2570: 10938 - SUPERFAMILY--SSF52266, at 468329 to 470280 10938

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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465,364 + -0.3
465,378 - -0.2
465,379 + -1.5
465,390 - -0.9
465,531 - -2.2
465,666 - 0.1
465,667 - -1.8
465,674 - -0.2
465,684 + 0.7
465,687 + -0.1
465,693 + -0.1
465,725 + -0.8
465,732 + 0.2
465,822 - 2.4
465,855 - 0.3
465,857 - 1.0
465,877 + -1.4
465,888 - 2.2
465,889 - 2.2
465,892 + -0.9
465,903 + -0.2
465,912 - 1.1
465,920 + -0.9
465,928 - -0.7
465,965 - -0.8
465,987 + 0.2
465,990 + 0.8
466,014 + -1.2
466,015 - -1.4
466,021 + -0.7
466,155 - 0.4
466,157 + -1.1
466,309 - 10937 mRNA_2569 0.11 -0.4
466,500 + 10937 mRNA_2569 0.20 -0.2
466,507 + 10937 mRNA_2569 0.21 0.8
466,775 + 10937 mRNA_2569 0.34 -0.6
467,033 - 10937 mRNA_2569 0.46 -0.4
467,047 - 10937 mRNA_2569 0.47 1.6
467,184 + 10937 mRNA_2569 0.53 0.2
467,248 + 10937 mRNA_2569 0.57 -0.9
467,620 - 10937 mRNA_2569 0.75 0.4
467,871 + 10937 mRNA_2569 0.87 -0.6
468,063 - -0.4
468,349 + -0.2
468,356 + -0.6
468,459 - 1.2
468,636 - 10938 mRNA_2570 0.16 -0.1
468,661 + 10938 mRNA_2570 0.17 2.2
468,924 + 10938 mRNA_2570 0.30 0.6