Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2567

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2566: 10934 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 458931 to 461054 10934 mRNA_2567: 10935 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 461158 to 463055 10935 mRNA_2568: 10936 - KOG2504 Monocarboxylate transporter, at 463556 to 465484 10936

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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460,248 - 10934 mRNA_2566 0.62 -1.4
460,359 - 10934 mRNA_2566 0.67 1.0
460,583 - 10934 mRNA_2566 0.78 0.4
460,662 - 10934 mRNA_2566 0.81 0.7
460,919 + -0.6
461,067 + -0.1
461,092 - -0.5
461,368 + 10935 mRNA_2567 0.11 0.9
461,384 - 10935 mRNA_2567 0.12 0.2
461,393 - 10935 mRNA_2567 0.12 0.5
461,721 + 10935 mRNA_2567 0.30 -0.4
461,748 - 10935 mRNA_2567 0.31 -2.4
461,814 + 10935 mRNA_2567 0.35 0.3
461,993 + 10935 mRNA_2567 0.44 -0.2
462,012 + 10935 mRNA_2567 0.45 0.0
462,027 + 10935 mRNA_2567 0.46 -0.0
462,438 - 10935 mRNA_2567 0.67 0.9
462,439 - 10935 mRNA_2567 0.67 0.4
462,694 - 10935 mRNA_2567 0.81 0.4
462,886 + -0.9
463,011 + 1.5
463,143 - -0.2
463,260 + 0.1
463,456 + -0.3
463,474 + 0.9
463,523 - -0.9
463,527 - 0.8
463,535 - 0.5
463,537 - -0.7
463,579 + -1.0
463,649 - -0.5
463,686 + -1.0
463,687 - -0.2
463,747 + 1.4
463,835 + 10936 mRNA_2568 0.14 -1.3
463,842 + 10936 mRNA_2568 0.15 -0.3
463,925 - 10936 mRNA_2568 0.19 2.3
463,956 + 10936 mRNA_2568 0.21 -0.9
464,037 - 10936 mRNA_2568 0.25 1.5