Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2542

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2541: 10909 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 400071 to 401322 10909 mRNA_2542: 10910 - Hypothetical Protein, at 401521 to 403165 10910 mRNA_2543: 10911 - Hypothetical Protein, at 403439 to 404457 10911

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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401,016 + 10909 mRNA_2541 0.75 -2.0
401,290 + -0.1
401,304 + 0.6
401,423 - -0.0
401,442 - 0.2
401,444 + 0.7
401,460 + -0.3
401,469 + -0.1
401,590 + 1.3
401,639 - -0.1
402,076 + 10910 mRNA_2542 0.34 0.3
402,358 - 10910 mRNA_2542 0.51 0.2
402,379 + 10910 mRNA_2542 0.52 -1.4
402,792 - 10910 mRNA_2542 0.77 -1.1
402,813 - 10910 mRNA_2542 0.79 0.0
402,827 + 10910 mRNA_2542 0.79 0.3
402,941 + 10910 mRNA_2542 0.86 -1.2
403,062 - -0.6
403,063 + 0.7
403,069 + 1.3
403,374 + -1.8
403,396 + 1.9
403,419 + 1.0
403,633 + 10911 mRNA_2543 0.19 2.7
403,640 + 10911 mRNA_2543 0.20 -0.1
404,000 - 10911 mRNA_2543 0.55 0.0