Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2495

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2494: 10862 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 281884 to 283232 10862 mRNA_2495: 10863 - K03507 DPB11 DNA replication regulator DPB11, at 283554 to 287606 10863 mRNA_2496: 10864 - KOG0254 Predicted transporter (major facilitator superfamily), at 288113 to 290739 10864

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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282,757 - 10862 mRNA_2494 0.65 -1.2
282,795 - 10862 mRNA_2494 0.68 -0.3
282,913 - 10862 mRNA_2494 0.76 1.2
282,935 - 10862 mRNA_2494 0.78 0.2
283,058 + 10862 mRNA_2494 0.87 -1.8
283,199 - 1.0
283,362 - 0.9
283,467 + -1.4
283,496 - 1.4
283,500 - -1.5
283,647 + -0.5
284,990 - 10863 mRNA_2495 0.35 1.6
285,415 - 10863 mRNA_2495 0.46 -0.8
285,865 + 10863 mRNA_2495 0.57 -0.1
286,057 - 10863 mRNA_2495 0.62 0.6
286,131 - 10863 mRNA_2495 0.64 0.4
286,641 - 10863 mRNA_2495 0.76 -1.1
286,852 - 10863 mRNA_2495 0.81 0.7
287,017 + 10863 mRNA_2495 0.85 2.4
287,625 - -0.8
287,896 - 0.6
287,906 - -0.4
287,907 - -0.1
287,912 + 0.2
288,064 + 0.5
288,071 - 0.5
288,079 + 0.6
288,237 + 0.5
288,367 + -0.1
288,386 - 10864 mRNA_2496 0.10 -1.4