Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2421

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2420: 10788 - KOG2618 Uncharacterized conserved protein, at 80430 to 82352 10788 mRNA_2421: 10789 - K11800 WDR22, BCRP2 WD repeat-containing protein 22, at 82479 to 84495 10789 mRNA_2422: 10790 - KOG2342 Uncharacterized conserved protein, at 84636 to 85865 10790

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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81,484 - 10788 mRNA_2420 0.55 0.3
81,764 + 10788 mRNA_2420 0.69 -1.2
82,499 - -0.8
82,566 - -1.3
83,061 - 10789 mRNA_2421 0.29 0.1
83,246 + 10789 mRNA_2421 0.38 -0.9
83,395 + 10789 mRNA_2421 0.45 -0.6
83,542 - 10789 mRNA_2421 0.53 0.2
83,695 + 10789 mRNA_2421 0.60 -0.4
84,122 - 10789 mRNA_2421 0.81 0.2
84,122 - 10789 mRNA_2421 0.81 1.3
84,129 + 10789 mRNA_2421 0.82 -0.1
84,129 + 10789 mRNA_2421 0.82 0.9
84,375 - 1.8
84,376 - -0.4
84,835 + 10790 mRNA_2422 0.16 -0.3
84,838 - 10790 mRNA_2422 0.16 1.2
84,839 + 10790 mRNA_2422 0.17 1.6
84,848 - 10790 mRNA_2422 0.17 -1.4
84,872 - 10790 mRNA_2422 0.19 0.1
84,894 - 10790 mRNA_2422 0.21 -0.6
85,177 - 10790 mRNA_2422 0.44 1.8
85,193 + 10790 mRNA_2422 0.45 0.6
85,195 - 10790 mRNA_2422 0.45 -0.9